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OVERVIEW
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IMAP project overview
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Link
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PART
01
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Software requirements for microbiome data analysis with
Snakemake workflows
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Link
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PART 02
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Downloading and exploring microbiome sample metadata
from SRA Database
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Link
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PART
03
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Downloading and filtering microbiome sequencing data
from SRA database
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Link
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PART
04
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Quality control of microbiome next-generation
sequencing reads
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Link
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PART
05
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Microbial profiling using MOTHUR and Snakemake
workflows
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Link
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PART
06
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Microbial profiling using QIIME2 and Snakemake
workflows
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Link
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PART 07
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Processing output from 16S-based microbiome
bioinformatics pipelines
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Link
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PART
08
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Exploratory analysis of processed 16S-based microbiome
data
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Link
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PART
09
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Statistical analysis of processed 16S-based microbiome
data
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Link
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PART 10
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Machine learning analysis of processed 16S-based
microbiome data
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Link
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