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IMAP:
Integrated Microbiome Analysis Pipelines
:
End-to-End Practical User Guides Using Integrated Approaches
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Table of contents
IMAP-Part 08: Microbiome Data Exploration Guide
DATA EXPLORATION
1
Exploratory Data Analysis (EDA) of Microbiome Communities
DEMO DATASET
2
Microbiome Demo Datasets
START EXPLORING
3
Exploration of Visualization Types
BAR CHARTS
4
Bar Plots
DIFFERENTIAL ABUNDANCE
5
Differential Analysis of Microbiome Data
ORDINATION
6
Ordination Plots
RELATIONSHIP ANALYSIS
7
Patterns and Associations Analysis
PHYLOGENY ANALYSIS
8
Phylogenetic Analysis
APPENDIX
A
IMAP GitHub Repos
B
Session Information
References
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References
B
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